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Develops data analysis and visualization software for microarray gene expression data in Redwood City, California.
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Strand Life Sciences Algorithms for life  Home Technologies Decision Analytics Products The Team Milestones Careers Contact Us Sitemap...
http://www.strandgenomics.com/

AiO
Downloadable package integrating database, oligo ordering, DNA and protein analysis programs from Duesseldorf, Germany.
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AiO All in One AiO  Karreman a program integrating Oligo ordering/Data Base and DNA/Protein programs. About AiO: General Info Handbook (pdf 824 kb) Bioinformatics Some Screen Shots: a picture tells more than a thousand words. Formats DNA with sites Coordinates Frequency Plasmid map Plasmid Editor...
http://134.99.88.55/aio/

Microarray analysis, lab inventory, and primer sequence database tools from San Francisco, California.
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Chang Bioscience Home  An electronic protocol book with 500 protocols and 100 recipes. A great quick and practical reference for bench scientists as well as for new students. Only $25 (including a Free USB Flash Drive Get A Copy Custom Antibody Services We...
http://www.changbioscience.com/

Links to programs and databases for online analysis of DNA, RNA and protein sequences from Pittsburg, Pennsylvania.
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The page cannot be found  The page you are looking for might have been removed, had its name changed, or is temporarily unavailable. Please try the following: Make sure that the Web site address displayed in the address bar of your browser is spelled and...
http://www.mgb.pitt.edu/moleculartoolbox.htm

Consensus, multiplex and degenerate primers, oligonucleotide database, secondary structure and difficult sequencing for researchers in PCR and related technologies. Developed since 1989, by Molecular Biology Insights Inc.
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MBI: Oligo Primer Analysis Software, Primer Design  O performs a range of functions for researchers in PCR and related technologies; consensus, multiplex and degenerate primers, oligonucleotide database, secondary structure, LCR and more. The software runs on Mac PC computers on the newest operating systems available. Manufacturer: Molecular...
http://www.oligo.net/

Developers of software for real time PCR primer design, TaqMan, molecular beacons, DNA microarray analysis, drawing restriction plasmid maps, gateway cloning experiments, protein interaction network and functional genomics
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PREMIER Biosoft International  Pacific more testimonials Citations Prestigious Clients Software to Accelerate Research in Molecular Biology AlleleID (for Pathogen Detection using qPCR assays) A comprehensive desktop tool designed to address the challenges of pathogen detection, bacterial identification, species identification and taxa discrimination using...
http://www.premierbiosoft.com/

Makers of restriction enzyme database program, to design cloning experiments and produce high resolution graphics of plasmid maps and alignments. Includes corporate details of company in Bradford, Ontario.
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Redasoft Corporation  Redasoft develops intuitive software that helps life scientists visually analyze genetic data and design molecular cloning experiments more quickly and with fewer errors. Latest News Products In Focus MiraiBio and Redasoft Form Product Alliance Companies announce collaboration at IDC's Drug...
http://www.redasoft.com/

Software for transcription and cell cycle genes, providing peak intervals, max values as a function of decay of gene-activating principle, inhibitory mRNA, gene amplification, anabolic capacity and proteolysis.
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Gene kinetics  Why are the control mechanisms of cell proliferation elusive 8211;Because they are kinetic! Find out how the proliferation of biological cells may be simulated based on only five equations relating to 1000 pages of bench-top results 19 equations, 132 literature...
http://www.scienceandresearchdev...lopmentinstitute.com/genkia.html

LOLA is a platform for uploading and comparing microarray generated gene lists, with curated, annotated and published data linked to citations, in an interface maintained by the Genomics Core Facility, George Washington University.
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LOLA  A allows researchers to measure the similarity of gene lists in order to identify genes that are robustly changed across laboratories, studies, and platforms, and within and between species. Furthermore, LOLA compares lists at a gene-level so that probes mapping...
http://lola.gwu.edu/

Microarray image analysis package which automatically grids spots, flags bad features, and plots analysis results. From Niles Scientific, Portola Valley, California.
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Niles Scientific Welcome to SpotReaderâ„¢  ...
http://www.nilesscientific.com/

Program from BJ Diagnostik GmbH that reads and processes DNA-fragment analysis files measured on ABI DNA-Sequencers [English and German].
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Bioinformatik  Match reads and processes DNA-fragment analysis files measured on ABI (Applied Biosystems) DNA-Sequencers. The whole system is written under the Mathematica programming language. Mathematica 4.1 or higher must be installed on the computer (or network) were DNA-Match shall be used....
http://www.linkage-analysis.com/

A web-based system for interactive design of oligo DNA for transcription profiling (hybridization) of genes.
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 A for transcription profiling (hybridization) of genes of The oligodb system uses the DNA-transcripts of ENSEMBL By using this software you take notice of the [Disclaimer Please cite this [Reference] which appreared in Bioinformatics! Available organisms Homo_sapiens Mus_musculus Drosophila_melanogaster] Other...
http://bioinf.charite.de/oligodb/

The program makes statistical analysis and evaluation of the biological significance from microarray data.
http://www.stud.uni-karlsruhe.de/~uzbar

Provides software and custom software development for the visualization, analysis and classification of gene expression and proteomics data, image-guided surgery and information technology.
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Improved Outcomes: Home Software for gene expression (microarray) and proteomics analysis as well as software consulting for bioinformatics, image guided surgery (IGS) and information technology (IT  See the full press release for more details. This is also the first release of GeneLinker by Improved Outcomes Software Inc following Predictive Patterns Software Inc s merger with Visible Bytes Software Inc These new releases focus primarily on importing...
http://www.improvedoutcomes.com

Supplies software for automated analysis and quantification of microarray images.
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Koada Technology Home Koadarray and consultancy services  Software development and consultancy services. Specialization in molecular biology and laboratory instrumentation. Home Products Ordering Support Services Contact Press About us Latest news Koada Technology is pleased to announce the release of V2.4 of Koadarray, its unique software for automated...
http://www.koada.com

Software for Analysis of Protein and Nucleic-acid Sequences.
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Delila: Software for Information Analysis of Protein and Nucleic-acid Sequences, including Sequence Logos  Delila programs were designed to manipulate sets of sequence fragments. Some of the programs are used to create sequence logos and sequence walkers while others are tools that I find useful such as rembla and the TheThe program. Arnold's Laws...
http://www.lecb.ncifcrf.gov/~toms/delila.html

Company selling software intended for molecular biology.
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DNA Software Home Page  Design beacons alone or in tandem with a set of primers against DNA or RNA. Design beacons against alleles: SNPs, insertions and deletions are no problem Consider modifications on your beacons and see how they affect your design Consider secondary...
http://www.dnasoftware.com/

Katalog of links to sources of software for molecular biology.
http://www.mpiz-koeln.mpg.de/~we...haa/Adis/DNA-software-links.html

From the Pittsburgh Superconputing Center, Carnegie Mellon University, Pittsburgh, USA.
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Nucleic Acid and Protein Sequence Analysis software  Tutorials on sequence analysis topics. Software EMBOSS, nucleic acid and protein sequence analysis. FASTA/ TFASTA/ FASTX/ TFASTX compares a protein or DNA sequence to all of the entries in a sequence library. GCG Wisconsin package for nucleic acid analysis. Genewise,...
http://www.psc.edu/general/softw...ategories/sequence_analysis.html

A web-based tool to annotate lists of genes derived from microarray experiments. The annotations are generated by searching literature databases (Medline, GeneRIF) for the gene's synonyms co-occurances with user-provided terms.
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MILANO Microarray Literature-based Annotation  This program performs automatic searches in PubMed or the GeneRIF collection for articles containing co-occurrences of search terms with a list of genes (e.g. from a microarray experiment The program is used by pasting the list of Gene ID's or...
http://milano.md.huji.ac.il/

A web-based system for design of oligo DNA for hybridization of genes from Homo sapiens, Mus musculus and Drosophila melanogaster.
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 A for transcription profiling (hybridization) of human genes. The oligodb system uses the human DNA-transcripts of ENSEMBL (v.15.33, last update 7/2003 By using this software you take notice of the [Disclaimer Please cite this [Reference] which appreared in Bioinformatics NEW:...
http://oligodb.charite.de/

Freeware for clustering, comparing, and visualizing short time series gene expression data, maintained at Carnegie Mellon University, Pittsburgh.
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STEM: Short Time-series Expression Miner  Java program for clustering, comparing, and visualizing short time series gene expression data from microarray experiments 8 time points or fewer STEM allows researchers to identify significant temporal expression profiles and the genes associated with these profiles and to compare...
http://www.cs.cmu.edu/~jernst/stem/

Program for statistical analysis and evaluation of the biological significance from microarray data. Includes key features, registration and download for Windows and Linux.
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MB DNA Analysis  Latest version information and patches (espessially for the new users) are available [here Linux users go [here how to run MB under Linux) Help us improve our program: make a [donation] Watch the progress of the development at our to-do-list...
http://www.stud.uni-karlsruhe.de/~uzbar/